Ok, so finally have rounded up the majority of parts to rebuild my engine. I had a spare hour today so I put a new bearing in the new cush drive cluster and fitted to new case. I then fitted the gear cluster which was a new(er) second hand drive shaft with 2 of my original gears and 2 newer less worn gears, new cruciform and rod. Once I had hammered the driveshaft through the new rear axle bearing (yes with a drift and not smashing the end of the rod) I noticed there was a small amount of movement with the rear axle and it didn't seem like the two sets of gears were meshing properly. I would have to push the rear axle forwards a couple of mm to have them mesh without slipping at some points. I then put the fly side case on temporarily to see if this would seat the rear axle properly through both sets of bearings but I could still get some of the gears to slip when spinning the Cush drive and applying resistance to the axle spline.
I noticed I could pull the rear axle out of the engine case as it wasn't seated firmly inside the bearing.
Would this mean I have a mismatched set gear clusters and the newer axle may be more worn than I thought meaning its not tight in the rear bearing?